You should position the body side front
Door Hinge to the alignment marks, install the bolts retaining the body side door hinge to the body, then lower the front door down onto the body side hinge straps, install the bolts retaining the front door hinge keeper straps, connect the front door wiring harness connectors, and install the front door wiring harness grommet to the body, then install the bolt retaining the front door check link to the body, finally inspect the door for proper operation and alignment.